Details
- scope
- human cortex, snRNA-seq, TSC patients
- section_id
- section_03
- source_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_03_evidence_package.json
- effect_size
- MGE-derived SST+ subpopulation shows abnormal NKCC1/KCC2 ratio and downregulated GABA-A receptor subunits relative to controls
- review_repo
- ComputationalReviewVIP
- section_ref
- wiki_page:computationalreviewvip-03-development
- source_kind
- review_finding
- source_path
- evidence/section_03_evidence_package.json
- source_span
- The disrupted maturation of SST+ interneurons may undergo an incomplete switch from excitatory to inhibitory GABAergic signaling during development, resulting in reduced inhibitory properties.
- study_system
- human cortex, snRNA-seq, TSC patients
- section_title
- Developmental Origins and Postnatal Maturation
- evidence_summary
- Body, Results: single-nuclei RNA-seq in TSC patient cortical material, with cell-type-specific marker analysis of MGE- vs CGE-derived interneurons.
- review_bundle_ref
- analysis_bundle:ab-2ce40c33e827
- replication_status
- single-study
- review_package_ref
- analysis_bundle:ab-2ce40c33e827
- source_artifact_ref
- wiki_page:computationalreviewvip-03-development
- origin_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_03_evidence_package.json
- commit_sha
- 95e761177f7d2ec565983d3307c14ec238f9677c
- created_by
- persona-jerome-lecoq-gbo-neuroscience
- repository_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewVIP
Raw fields (5)
- claim_text
In tuberous sclerosis complex (TSC) patient cortex, somatostatin-expressing (SST+) MGE-derived interneurons display an immature transcriptional signature including an abnormal NKCC1/KCC2 ratio, suggesting an incomplete excitatory-to-inhibitory GABAergic developmental switch — a CGE-vs-MGE lineage-selective vulnerability with implications for postnatal interneuron maturation.
- raw_fields
{ "n": null, "doi": "10.1007/s00401-024-02737-7", "claim": "In tuberous sclerosis complex (TSC) patient cortex, somatostatin-expressing (SST+) MGE-derived interneurons display an immature transcriptional signature including an abnormal NKCC1/KCC2 ratio, suggesting an incomplete excitatory-to-inhibitory GABAergic developmental switch — a CGE-vs-MGE lineage-selective vulnerability with implications for postnatal interneuron maturation.", "title": null, "cite_key": "Scheper2024", "evidence": "Body, Results: single-nuclei RNA-seq in TSC patient cortical material, with cell-type-specific marker analysis of MGE- vs CGE-derived interneurons.", "effect_size": "MGE-derived SST+ subpopulation shows abnormal NKCC1/KCC2 ratio and downregulated GABA-A receptor subunits relative to controls", "text_access": "fulltext", "study_system": "human cortex, snRNA-seq, TSC patients", "_source_cluster": "cluster_02_development_lineage", "replication_status": "single-study", "_source_cluster_index": 5, "claim_source_sentence": "The disrupted maturation of SST+ interneurons may undergo an incomplete switch from excitatory to inhibitory GABAergic signaling during development, resulting in reduced inhibitory properties.", "replication_evidence_dois": [], "effect_size_source_sentence": "Notably, this study reveals markers of immaturity specifically in SST+ interneurons, including an abnormal NKCC1/KCC2 ratio, indicating an imbalance in chloride homeostasis crucial for the postsynaptic consequences of GABAergic signaling as well as the downregulation of GABA A receptor subunits." }- source_refs
[ "paper:paper-9a4f0475d0ca" ]
- evidence_refs
[ { "ref": "paper:paper-9a4f0475d0ca" } ]- source_policy
{ "mode": "public_source_pointer_with_short_context", "notes": [ "Local review repositories are read-only inputs.", "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose." ], "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c", "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP" }