Details

scope
mouse visual cortex; Patch-seq and whole-brain fMOST morphology reconstruction
section_id
section_05
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_05_evidence_package.json
effect_size
review_repo
ComputationalReviewRecurrence
section_ref
wiki_page:computationalreviewrecurrence-05-horizontal
source_kind
review_finding
source_path
evidence/section_05_evidence_package.json
source_span
MET-type labels, anatomical location, and transcriptomically-correlated morphological properties were used to build models to predict specific projection targets for individual neurons.
study_system
mouse visual cortex; Patch-seq and whole-brain fMOST morphology reconstruction
section_title
5. Horizontal long-range intracortical excitatory connections in mouse — patchy L2/3-L5 axons, similarity tuning, distance-decay
review_bundle_ref
analysis_bundle:ab-d9c479db9be9
replication_status
novel
review_package_ref
analysis_bundle:ab-d9c479db9be9
source_artifact_ref
wiki_page:computationalreviewrecurrence-05-horizontal
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_05_evidence_package.json
commit_sha
79ce062d54a924ce05953ec90aa9d26044d2b48f
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence
Raw fields (6)
claim_text
MET-type labels, anatomical location, and transcriptomically-correlated morphological properties of excitatory neurons in mouse visual cortex can be used to build models that predict specific long-range projection targets for individual neurons.
raw_fields
{
  "n": 1544,
  "doi": "10.1101/2023.11.25.568393",
  "claim": "MET-type labels, anatomical location, and transcriptomically-correlated morphological properties of excitatory neurons in mouse visual cortex can be used to build models that predict specific long-range projection targets for individual neurons.",
  "cite_key": "Sorensen2023",
  "evidence": "Patch-seq data from 1,544 excitatory neurons in mouse visual cortex were combined with whole neuron morphology (WNM) reconstructions using fMOST imaging, and local morphology served as the key link between transcriptomic identity and long-range interareal axonal projections.",
  "effect_size": "",
  "text_access": "fulltext",
  "study_system": "mouse visual cortex; Patch-seq and whole-brain fMOST morphology reconstruction",
  "argument_role": "supporting",
  "replication_status": "novel",
  "claim_source_sentence": "MET-type labels, anatomical location, and transcriptomically-correlated morphological properties were used to build models to predict specific projection targets for individual neurons.",
  "source_provenance_status": "ok",
  "replication_evidence_dois": [],
  "effect_size_source_sentence": ""
}
source_refs
[
  "paper:paper-pm-38168270"
]
evidence_refs
[
  {
    "ref": "paper:paper-pm-38168270"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
}
evidence_summary
Patch-seq data from 1,544 excitatory neurons in mouse visual cortex were combined with whole neuron morphology (WNM) reconstructions using fMOST imaging, and local morphology served as the key link between transcriptomic identity and long-range interareal axonal projections.

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