Details

scope
Awake mouse V1 layer 2/3 (two-photon calcium imaging)
section_id
section_15
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_15_evidence_package.json
effect_size
single-AP detection in somata; week-scale spine tuning stability
review_repo
ComputationalReviewRecurrence
section_ref
wiki_page:computationalreviewrecurrence-15-methods-limits
source_kind
review_finding
source_path
evidence/section_15_evidence_package.json
study_system
Awake mouse V1 layer 2/3 (two-photon calcium imaging)
evidence_summary
Single-spike resolution in L2/3 somata; single-spine orientation tuning resolution; week-scale longitudinal stability in mouse V1.
review_bundle_ref
analysis_bundle:ab-d9c479db9be9
replication_status
landmark-method
review_package_ref
analysis_bundle:ab-d9c479db9be9
source_artifact_ref
wiki_page:computationalreviewrecurrence-15-methods-limits
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_15_evidence_package.json
commit_sha
79ce062d54a924ce05953ec90aa9d26044d2b48f
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence
Raw fields (7)
claim_text
GCaMP6 indicators reliably detect single action potentials in layer 2/3 pyramidal somata and orientation-tuned synaptic calcium transients in individual dendritic spines of awake mouse V1, with structurally persistent spine orientation tuning stable over weeks — defining the present sensitivity ceiling for in-vivo calcium imaging in mouse cortex.
raw_fields
{
  "n": 0,
  "doi": "10.1038/nature12354",
  "claim": "GCaMP6 indicators reliably detect single action potentials in layer 2/3 pyramidal somata and orientation-tuned synaptic calcium transients in individual dendritic spines of awake mouse V1, with structurally persistent spine orientation tuning stable over weeks — defining the present sensitivity ceiling for in-vivo calcium imaging in mouse cortex.",
  "cite_key": "Chen2013",
  "evidence": "Single-spike resolution in L2/3 somata; single-spine orientation tuning resolution; week-scale longitudinal stability in mouse V1.",
  "effect_size": "single-AP detection in somata; week-scale spine tuning stability",
  "text_access": "fulltext",
  "study_system": "Awake mouse V1 layer 2/3 (two-photon calcium imaging)",
  "argument_role": "supporting",
  "replication_status": "landmark-method",
  "claim_source_sentence": "In layer 2/3 pyramidal neurons of the mouse visual cortex, GCaMP6 reliably detected single action potentials in neuronal somata and orientation-tuned synaptic calcium transients in individual dendritic spines. The orientation tuning of structurally persistent spines was largely stable over timescales of weeks.",
  "source_provenance_status": "ok",
  "replication_evidence_dois": [],
  "effect_size_source_sentence": "GCaMP6 reliably detected single action potentials in neuronal somata and orientation-tuned synaptic calcium transients in individual dendritic spines."
}
source_refs
[
  "paper:577e8d9c-6914-4e20-884c-e57013fb6564"
]
source_span
In layer 2/3 pyramidal neurons of the mouse visual cortex, GCaMP6 reliably detected single action potentials in neuronal somata and orientation-tuned synaptic calcium transients in individual dendritic spines. The orientation tuning of structurally persistent spines was largely stable over timescales of weeks.
evidence_refs
[
  {
    "ref": "paper:577e8d9c-6914-4e20-884c-e57013fb6564"
  }
]
section_title
15. Methodological limits and emerging tools — what current mouse-cortex tools cannot yet measure about E→E recurrence (subthreshold network activity, fast plasticity in vivo, millimetre-scale dynamic connectomes), and what is on the near horizon
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
}

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